• Example saccharides
• Example non-saccharides
• RCSB Ligand Expo entries
• Saccharide entries in Ligand Expo
• Saccharide fingerprints

Submission ID: 659
File name: alatis_output_compound.sdf

Download outputs in JSON format here.

Probabilities of the best carbohydrate fragment:

• Fragment probability: 1.00
• Compound probability: 0.33

List of identified carbohydrate fragments:

• C₆H₇N₁O₂
  Fragment probability: 1.00
  Fragment mass: 112.10640000000001
  Fragment main chain atoms: [22, 19, 18, 39, 26]
  Fragment all atoms: [22, 57, 37, 63, 19, 56, 18, 55, 3, 44, 2, 43, 39, 26, 58, 34]
  

• C₆H₇O₁
  Fragment probability: 0.38
  Fragment mass: 97.09179999999999
  Fragment main chain atoms: [3, 18, 39]
  Fragment all atoms: [3, 44, 2, 43, 8, 49, 50, 18, 55, 19, 56, 22, 57, 39]
  

• C₅H₆N₁O₁
  Fragment probability: 0.36
  Fragment mass: 84.0963
  Fragment main chain atoms: [2, 3]
  Fragment all atoms: [2, 43, 8, 49, 50, 30, 3, 44, 18, 55, 19, 56, 39]
  

• C₃H₃N₁O₁
  Fragment probability: 0.36
  Fragment mass: 79.0997
  Fragment main chain atoms: [2, 8, 30, 25]
  Fragment all atoms: [2, 43, 8, 49, 50, 30, 25, 38]
  

Most similar ligands:

Citation:

• Hesam Dashti, William M. Westler, Jonathan R. Wedell, Olga V. Demler, Hamid R. Eghbalnia, John L. Markley & Samia Mora, Probabilistic identification of saccharide moieties in biomolecules and their protein complexes, Scientific Data volume 7, Article number: 210 (2020), https://doi.org/10.1038/s41597-020-0547-y, https://www.nature.com/articles/s41597-020-0547-y

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