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v 1.1 (Spring 2020)

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Process a structure file

Publication files:

Submission ID: 5KX
File name: alatis_output_compound.sdf

Formula: C3Cl1H3N2
Compound mass: 102.52220000000001
Compound with ALATIS labels (download):

Download outputs in JSON format here.


Probabilities of the best carbohydrate fragment:

  • Fragment probability: 0.00
  • Compound probability: 0.00


List of identified carbohydrate fragments:



Most similar ligands:

Ligand Expo IDPDB protein complex ID
5KX5E9K
IMD4YZX
4N5B
3KKC
4YZO
4EFS
4IRP
4JFV
4JQ9
5VE5
6AGI
5Z68
5MOG
3R02
5XAG
5DYF
4JL2
3LAI
4PSN
4NCR
5DWM
5HA5
2Z3T
6IS1
5V7Y
6OP4
4XH7
4UZI
4JFS
5FJI
4FXX
2KIL
4AOR
6C5N
5WO1
1PM1
4O6I
3RF4
4Q40
2R4J
3L5O
3R3Q
1FI9
3Q38
3E49
4OWM
5W4A
2Y73
6RGI
3URN
3D71
2G5F
3ECG
5H4J
3EBZ
4ZEN
5BVG
6NAL
4E6R
5VS0
3PS4
6END
5YCJ
3V13
6G7X
1HEZ
5UJU
5VE4
3IG9
5IXR
5UWC
4OWU
5OKS
2Y74
3SBR
4UG1
6DQ3
3L07
3S45
5OKK
3FUL
3CHQ
5TEL
2QD1
4Q2B
4QKR
3UR2
4GYU
3HQ9
2ZC0
6ENC
4TKV
3S42
5N3W
3HDJ
3FUK
4ELC
3FH5
5OJA
1U17
4EL4
6OP3
5BN1
5DW5
4EJ5
3D70
3C2Q
4KQR
6ENB
3DKQ
5JCB
3URB
6OWZ
3HCO
1MUY
6PA3
1R8E
6OB2
5B6Q
4XXT
4PCS
3G5O
3WG5
1UGI
3SL9
3EER
3EC0
3MVU
4JL1
6EJX
5JIA
5JF4
3WS6
6OP1
3K1M
5E53
2OWQ
3LAH
4BF7
5OK7
3FVB
6N92
3HX8
5INA
4ME4
5LZG
1MRD
4JYS
5NB8
2VD3
5DW6
3NRB
4DM3
5BO3
6PAC
3FY4
4W9N
4W6F
4MCW
5BVH
5ONK
6BIE
4V06
5AIF
4R7L
2RD9
4ZLY
6F9U
2O3P
4JBS
6EPB
3R04
4O2B
2DKK
6HMJ
2G8C
3DEE
1L5N
4W7E
4WSK
6PA8
3GFF
2O63
5OKE
3V7M
5OJC
5HKO
3Q6R
4M7S
3FTZ
1K6Z
2NPJ
4YJ2
4EWG
1I12
5WNW
1JRL
5C6F
4MGR
6PBK
5DDK
4KRY
6DHT
5JF7
5Z4P
4ONG
2NUH
5J6C
5YNT
4LJO
3Q3A
3FU3
4TKU
3FTU
1HX3
5DGC
1L9E
3CHP
5HN3
4PKD
5YNU
2QD2
6OWY
1YXU
3MYR
5YMX
3F0Y
5BO2
1WWJ
5OKH
3FH7
4O6H
6OWX
2QCU
6NKE
3VC4
1PZN
5VLB
4LZD
1I1D
1W7C
3SBP
3UVC
6GL2
2QZC
5OKB
3FUN
5DKF
3T5T
3NO6
6D2M
4C5B
4WI1
6JFJ
3SMV
5LKV
3FCS
1H19
2GO3
6HFW
1UUY
5LIE
6OP2
4J27
3FU5
2R4E
4AJX
4M08
1OUW
5OKA
2AH8
4U89
6IX5
1MUN
1T8K
3IGE
5U2W
1V0N
5XAF
2O64
5IOA
3TGB
2DDF
5IZ3
3VIV
3BQZ
4JFU
3VDP
4RS3
3QB8
6N93
2XMS
3FUI
2O65
5OKQ
4WKK
4HF3
4KNL
3U7Q
6MUJ
3URQ
5OKG
4PCT
6FEF
1F4U
1UUX
4OP7
5BNE
4OC9
1Y59
2GPE
5O1L
3GZ2
4J28
3C8L
6HEZ
3FTY
3WFX
6IBH
4KLR
3Q10
1HS6
3K1N
5OEQ
4ALW
4LJ3
1MRF
3VE5
2ZQN
4QP1
6OWE
1NMI
3U9W
5IOE
5OD9
5E5H
4PFB
2ZBX
1NU9
6JEQ
5DW4
6O9B
1Y5A
4J2K
5TJZ
4M09
2HBA
5O02
5MUQ
2X32
5AEN
4PAC
3EJ8
4PEE
6NX9
5KLX
4QME
4QHP
1MRE
5MEE
1V2G
1VDD
2WIY
4AIQ
4JFW
6G1J
5DLE
5JEX
5TEX
1MBI
3TQL
5D2N
1OD8
5XBT
3IUU
1W81
3UGX
4YZ0
2V08
5O11
5Z37
2R45
6GW6
3HTA
3PVK
4RVB
3LYG
4Z3V
5D2C
4JFT
2E2E
2HVF
4RN0
6PA5
3FHE
3FTS
4MTB
3CC1
2NPD
6N94
2OD5
2QLE
4ZLZ
6KFN
2YGT
3QZY
4ESE
4ZEH
6I7C
6NLP
5WO3
5OKR
6QKJ
3E6Q
3HCN
5OKJ
5M8E
4OWS
5MEF
2X7Z
4FRZ
3CHS
3GGD
6PA6
2ASN
5Y3Z
4OWO
5HC2
2NQC
4KNK
4WAT
1NU7
5U02
1GZ5
3FU6
5VWW
2ZEG
6H5W
6JFX
4YOL
3PA2
5GTD
3BR0
6GPZ
4QC4
4RN1
1GW6
4WAC
1DSP
5VRY
3KNZ
3Q6Q
4O6O
4UD1
6CHE
2C4W
4L36
5TJY
4G84
5OSK
4HVL
5HDR
2OH3
1YXS
6BBL
3NN1
4FF6
4X58
3D85
3FUM
3B7T
6FH1
3HCR
4GK8
6ENH
3FUF
5IOG
2OBL
2OGJ
2PSD
4GK9
3RF5
5MSE
4BCX
6MS3
1SXU
2X9X
4UY5
5W4D
5NI4
3NQ2
2F5T
5JF2
1WKQ
4PE3
3FUD
5EXK
6B1U
5O03
4MQQ
1RUW
5HSQ
4KQO
5FWQ
3U24
3TKB
1QPI
4GR8
5Z3J
5JH7
2WVT
1Y5B
3SOY
3C4E
2E18
5O12
1DSO
3SBQ
4Q7I
3HCP
5DF7
3HQ8
3MGC
4BOE
3B7U
1YXV
2Y24
6IS2
6BS3
4ZE4
6IBI
2UGI
5I5R
2XN2
4IJ1
4ASM
3Q39
6F9T
4QP2
2I6O
4X5D
4P8M
5DF1
5VRZ
4ZFM
1NOS
5BPD
4YCX
6IJ1
6F45
3FAV
5YNW
6OS5
2D6C
5U9C
4QP6
5TUG
3URA
1DS4
6M9U
4XAC
4ALV
4D6X
3TS4
4U3D
4YTB
4ZEP
4GFC
4AU8
3PGF
2W14
3SI0
4XXB
5M6K
4RSY
5C2L
4P8N
3CHR
5H6B
4ALU
3MOM
6E4F
4M0R
2H7Q
3PA1
4ZE5
4X59
3H87
1OAU
3FUH
5KCX
3FH8
4OWQ
4KF2
3LAT
3R01
3FTX
3OA6
5SXG
2PSE
1RKY
5EUO
5WO2
1KAE
2FMY
4P8L
3JTJ
6HFV
4KKD
4ADN
3Q93
3TCL
4D6Z
3P0K
5T9X
1N1I
3PFE
3T7D
3FUJ
1YWV
3ZJP
1CXA
2A0I
4PFD
4P8P
4P8Y
5GRO
3P9Y
1NOC
2NOS
4PW4
3VHB
2VZ5
3FPC
1IKJ
3FXU
2R46
4KSI
4E0U
3MBJ
1MRC
5DC9
3LRG
5LI9
4LSV
1PEE
5OLN
5O13
3FU0
4P8C
4YIC
4XAB
4HJI
2NPC
5KVC
3S67
6CY7
5JF8
5N6S
4UGI
4O2A
3TEM
4QVE
6PAB
5JF5
1AKY
3QK1
3K9T
3VBY
2HRC
2OPC
6HRI
3FTW
3L1O
4HPN
4X7F
3PH2
3CGX
2ZQO
2AT3
4QUO
1DP9
5ZBJ
3C1H
4KQQ
1U7R
4ZOF
3IHQ
4MB3
3M1J
6N97
4FCA
4YXB
5U8R
1AES
4KW5
3E2T
3K43
3R00
6BDL
4EFK
3POH
2YMV
1FI7
1DSE
1DSG
5GON
6IIY
3B7R
5HN4
5K1N
5K8Q
1W8K
4XMG
5ZH1
3AKY
5VT6
4X2V
5OJB
4EHR
4QT2
2WCR
4ZOJ
2NPK
4HHR
5A1G
3FUE
4LUE
4YJ3
4YZA
4QIR
4MBA
2VJ8
1YXX
1SQM
1V0M
2R5R
4MU1
2YNA
4KVL
2VNQ
2VYO
2W8X
3FTV
4J3G
1Y5E
3JW4
5GI5
4OWN
5VYH
3PMM
4EP6
6O5E
5K1J
4NCY
3QMA
4UIQ
3HMZ
3P76
1CCG
4W73
5V4B
4U3B
2NOP
1Y5U
5VRX
5JF3
6N96
3TE7
1WEG
4PII
3C1J
6J6M
4P8T
4QO3
5NFQ
1IRC
5OEP
4A7C
4FDP
4MPZ
2AI3MJL
6Q7K
2MZ4HEW
6IQ7
1AEU
MZY5GH0
5JT3

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Citation:

  • Hesam Dashti, William M. Westler, Jonathan R. Wedell, Olga V. Demler, Hamid R. Eghbalnia, John L. Markley & Samia Mora, Probabilistic identification of saccharide moieties in biomolecules and their protein complexes, Scientific Data volume 7, Article number: 210 (2020), https://doi.org/10.1038/s41597-020-0547-y, https://www.nature.com/articles/s41597-020-0547-y

Disclaimer:

  • The custom source code, developed using Python3 in the Linux environment. This work is copyrighted under the terms of GPL, and the results are released under CC0 1.0 Universal of the Open Science Framework. The web-service and the source codes are provided on an “as is” basis without warranty of any kind, either expressed or implied. Any usage of the web-server, or modification and application of the source codes are free for academic use when CTPIC publications are cited.
  • The NetwrokX library is used in the CTPIC source codes.
  • The Open Babel software package is used in the CTPIC source codes.

Contact:

For any question or concern please contact Hesam Dashti (hdashti@bwh.harvard.edu).