• Example saccharides
• Example non-saccharides
• RCSB Ligand Expo entries
• Saccharide entries in Ligand Expo
• Saccharide fingerprints

Submission ID: 46M
File name: alatis_output_compound.sdf

Download outputs in JSON format here.

Probabilities of the best carbohydrate fragment:

• Fragment probability: 1.00
• Compound probability: 1.00

List of identified carbohydrate fragments:

• C₆H₁₀O₆
  Fragment probability: 1.00
  Fragment mass: 178.13960000000006
  Fragment main chain atoms: [4, 5, 7, 16, 3, 6, 24, 10, 28, 11, 25, 29, 12, 27, 30]
  Fragment all atoms: [4, 5, 7, 16, 3, 23, 2, 21, 22, 15, 6, 26, 17, 24, 10, 28, 11, 25, 29, 12, 27, 30]
  

• C₈H₁₁O₆
  Fragment probability: 1.00
  Fragment mass: 190.15030000000002
  Fragment main chain atoms: [15, 2, 3, 6, 17, 9]
  Fragment all atoms: [15, 2, 21, 22, 3, 23, 16, 6, 26, 4, 24, 5, 25, 10, 28, 17, 9, 1, 8, 18, 19, 20, 13, 14, 31]
  

Most similar ligands:

Citation:

• Hesam Dashti, William M. Westler, Jonathan R. Wedell, Olga V. Demler, Hamid R. Eghbalnia, John L. Markley & Samia Mora, Probabilistic identification of saccharide moieties in biomolecules and their protein complexes, Scientific Data volume 7, Article number: 210 (2020), https://doi.org/10.1038/s41597-020-0547-y, https://www.nature.com/articles/s41597-020-0547-y

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