(CTPIC)
v 1.1 (Spring 2020)
Process a structure file
Publication files:
Submission ID: 429
File name: alatis_output_compound.sdf
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Formula: C25H30N2O10 Compound mass: 518.5118999999995 Compound with ALATIS labels (download): |
Download outputs in JSON format here.
Probabilities of the best carbohydrate fragment:
- Fragment probability: 0.97
- Compound probability: 0.11
List of identified carbohydrate fragments:
-
C2H3O2
Fragment probability: 0.97
Fragment mass: 55.0552
Fragment main chain atoms: [25, 35, 2]
Fragment all atoms: [25, 34, 35, 2, 41, 42, 43]
Most similar ligands:
| Ligand Expo ID | PDB protein complex ID |
| 429 | 1QXK |
| 941 | 1PYN |
| INX | 1G7G |
| 418 | 1PH0 |
| INZ | 1G7F |
Citation:
- Hesam Dashti, William M. Westler, Jonathan R. Wedell, Olga V. Demler, Hamid R. Eghbalnia, John L. Markley & Samia Mora, Probabilistic identification of saccharide moieties in biomolecules and their protein complexes, Scientific Data volume 7, Article number: 210 (2020), https://doi.org/10.1038/s41597-020-0547-y, https://www.nature.com/articles/s41597-020-0547-y
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- The NetwrokX library is used in the CTPIC source codes.
- The Open Babel software package is used in the CTPIC source codes.