• Example saccharides
• Example non-saccharides
• RCSB Ligand Expo entries
• Saccharide entries in Ligand Expo
• Saccharide fingerprints

Submission ID: 3JJ
File name: alatis_output_compound.sdf

Download outputs in JSON format here.

Probabilities of the best carbohydrate fragment:

• Fragment probability: 0.38
• Compound probability: 0.15

List of identified carbohydrate fragments:

• C₂H₃
  Fragment probability: 0.38
  Fragment mass: 85.1471
  Fragment main chain atoms: [3, 29]
  Fragment all atoms: [3, 48, 49, 50, 29]
  

• C₂H₃
  Fragment probability: 0.38
  Fragment mass: 85.1471
  Fragment main chain atoms: [4, 29]
  Fragment all atoms: [4, 51, 52, 53, 29]
  

• C₂H₃
  Fragment probability: 0.38
  Fragment mass: 85.1471
  Fragment main chain atoms: [5, 29]
  Fragment all atoms: [5, 54, 55, 56, 29]
  

• C₂H₃
  Fragment probability: 0.38
  Fragment mass: 70.13250000000001
  Fragment main chain atoms: [8, 30]
  Fragment all atoms: [8, 63, 64, 65, 30]
  

Most similar ligands:

Citation:

• Hesam Dashti, William M. Westler, Jonathan R. Wedell, Olga V. Demler, Hamid R. Eghbalnia, John L. Markley & Samia Mora, Probabilistic identification of saccharide moieties in biomolecules and their protein complexes, Scientific Data volume 7, Article number: 210 (2020), https://doi.org/10.1038/s41597-020-0547-y, https://www.nature.com/articles/s41597-020-0547-y

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