Logo Cheminformatics Tool for Probabilistic Identification of Carbohydrates
(CTPIC)
v 1.1 (Spring 2020)

Home
Process a structure file

Publication files:

Submission ID: 0ML
File name: alatis_output_compound.sdf

Formula: C11H15I1N2O2
Compound mass: 334.1529000000001
Compound with ALATIS labels (download):

Download outputs in JSON format here.


Probabilities of the best carbohydrate fragment:

  • Fragment probability: 0.50
  • Compound probability: 0.50


List of identified carbohydrate fragments:

  • C4H6N2O2
    Fragment probability: 0.50
    Fragment mass: 102.11149999999999
    Fragment main chain atoms: [1, 7, 10, 11]
    Fragment all atoms: [1, 17, 18, 19, 7, 26, 13, 10, 27, 15, 31, 11, 16, 14]



Most similar ligands:

Ligand Expo IDPDB protein complex ID
0ML
W6Q5MTF
9AL
61V5HK2
AS7

Flag Counter

Citation:

  • Hesam Dashti, William M. Westler, Jonathan R. Wedell, Olga V. Demler, Hamid R. Eghbalnia, John L. Markley & Samia Mora, Probabilistic identification of saccharide moieties in biomolecules and their protein complexes, Scientific Data volume 7, Article number: 210 (2020), https://doi.org/10.1038/s41597-020-0547-y, https://www.nature.com/articles/s41597-020-0547-y

Disclaimer:

  • The custom source code, developed using Python3 in the Linux environment. This work is copyrighted under the terms of GPL, and the results are released under CC0 1.0 Universal of the Open Science Framework. The web-service and the source codes are provided on an “as is” basis without warranty of any kind, either expressed or implied. Any usage of the web-server, or modification and application of the source codes are free for academic use when CTPIC publications are cited.
  • The NetwrokX library is used in the CTPIC source codes.
  • The Open Babel software package is used in the CTPIC source codes.

Contact:

For any question or concern please contact Hesam Dashti (hdashti@bwh.harvard.edu).